ProteoWizard
ChromatogramList_LockmassRefiner.hpp
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1//
2// $Id$
3//
4//
5// Original author: Matt Chambers <matt.chambers <a.t> vanderbilt.edu>
6//
7// Copyright 2008 Vanderbilt University - Nashville, TN 37232
8//
9// Licensed under the Apache License, Version 2.0 (the "License");
10// you may not use this file except in compliance with the License.
11// You may obtain a copy of the License at
12//
13// http://www.apache.org/licenses/LICENSE-2.0
14//
15// Unless required by applicable law or agreed to in writing, software
16// distributed under the License is distributed on an "AS IS" BASIS,
17// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
18// See the License for the specific language governing permissions and
19// limitations under the License.
20//
21
22
23#ifndef _CHROMATOGRAMLIST_LOCKMASSREFINER_HPP_
24#define _CHROMATOGRAMLIST_LOCKMASSREFINER_HPP_
25
26
29
30
31namespace pwiz {
32namespace analysis {
33
34
35/// ChromatogramList implementation to replace peak profiles with picked peaks
37{
38 public:
39
40 ChromatogramList_LockmassRefiner(const msdata::ChromatogramListPtr& inner, double lockmassMzPosScans, double lockmassMzNegScans, double lockmassTolerance);
41
42
43 static bool accept(const msdata::ChromatogramListPtr& inner);
44
45 virtual msdata::ChromatogramPtr chromatogram(size_t index, bool getBinaryData = false) const;
46
47 private:
48 double mzPositiveScans_, mzNegativeScans_, tolerance_;
49};
50
51
52} // namespace analysis
53} // namespace pwiz
54
55
56#endif // _CHROMATOGRAMLIST_LOCKMASSREFINER_HPP_
#define PWIZ_API_DECL
Definition Export.hpp:32
ChromatogramList implementation to replace peak profiles with picked peaks.
static bool accept(const msdata::ChromatogramListPtr &inner)
virtual msdata::ChromatogramPtr chromatogram(size_t index, bool getBinaryData=false) const
retrieve a chromatogram by index
ChromatogramList_LockmassRefiner(const msdata::ChromatogramListPtr &inner, double lockmassMzPosScans, double lockmassMzNegScans, double lockmassTolerance)
Inheritable pass-through implementation for wrapping a ChromatogramList.
boost::shared_ptr< Chromatogram > ChromatogramPtr
Definition MSData.hpp:624
boost::shared_ptr< ChromatogramList > ChromatogramListPtr
Definition MSData.hpp:785