Here is a list of all class members with links to the classes they belong to:
- m -
- m_block : CSHA1
- m_buffer : CSHA1
- m_by : ralab::base::base::utilities::SeqMinus< TReal >, ralab::base::base::utilities::SeqPlus< TReal >
- m_count : CSHA1
- m_digest : CSHA1
- m_from : ralab::base::base::utilities::SeqMinus< TReal >, ralab::base::base::utilities::SeqPlus< TReal >
- m_ions : pwiz::analysis::PepxmlRecordReader::record
- m_itr : pwiz::util::CharIndexedVectorConstIterator< T >, pwiz::util::CharIndexedVectorIterator< T >
- m_pObject : pwiz::util::Lock
- m_reserved0 : CSHA1
- m_reserved1 : CSHA1
- m_state : CSHA1
- m_workspace : CSHA1
- magnitude : TestDatum
- MagnitudeLorentzian() : pwiz::frequency::MagnitudeLorentzian
- magnitudeSample() : pwiz::data::FrequencyData
- Major() : pwiz::analysis::Version, pwiz::identdata::Version, pwiz::msdata::Version, pwiz::proteome::Version, pwiz::tradata::Version, pwiz::Version
- makeDelimitedListString() : pwiz::identdata::TextWriter
- makeDelimitedRefListString() : pwiz::identdata::TextWriter
- makeMS2_ : pwiz::analysis::SpectrumList_ChargeStateCalculator
- managedStorage() : pwiz::util::BinaryData< T >
- managemem : pwiz::minimxml::SAXParser::Handler::Attributes
- manufacturer() : pwiz::msdata::LegacyAdapter_Instrument
- manufacturerAndModel() : pwiz::msdata::LegacyAdapter_Instrument
- Map : pwiz::chemistry::Formula
- mapped_type : pwiz::util::shared_map< keyT, valueT, _Pr, _Alloc >, pwiz::util::virtual_map< keyT, valueT, _Pr, _Alloc >
- MascotReader() : pwiz::identdata::MascotReader
- mass : pwiz::chemistry::detail::Isotope, pwiz::chemistry::MassAbundance, pwiz::data::pepxml::AminoAcidModification, pwiz::data::pepxml::ModAminoAcidMass, pwiz::identdata::Residue, pwiz::util::MSIHandler::Record
- mass_ : ralab::base::resample::FTMSCompFunctor< TReal >
- MassAbundance() : pwiz::chemistry::MassAbundance
- massAnalyzerType : pwiz::msdata::SpectrumInfo
- massAnalyzerTypeAbbreviation() : pwiz::msdata::SpectrumInfo
- massDelta : pwiz::identdata::SearchModification
- massDeviation : pwiz::data::pepxml::Match
- massDiff : pwiz::data::pepxml::AminoAcidModification, pwiz::data::pepxml::SearchHit
- massError : pwiz::analysis::MSXDemultiplexer::Params, pwiz::analysis::OverlapDemultiplexer::Params, pwiz::analysis::SpectrumList_Demux::Params
- massNeutron : pwiz::analysis::SpectrumList_ChargeFromIsotope
- MassTable() : pwiz::identdata::MassTable
- massTable : pwiz::identdata::SpectrumIdentificationProtocol
- massTablePtr : pwiz::identdata::SpectrumIdentificationItem
- Match() : pwiz::data::pepxml::Match
- match() : pwiz::identdata::RegexCVMap
- MatchData() : pwiz::data::pepxml::MatchData
- matches : pwiz::data::pepxml::MatchData
- matchExact_ : pwiz::analysis::SpectrumList_FilterPredicate_ThermoScanFilter
- matchingTolerance : pwiz::analysis::MS2Deisotoper::Config, pwiz::analysis::PrecursorMassFilter::Config, TestETDMassFilter
- matchName() : pwiz::minimxml::SAXParser::Handler::Attributes::attribute
- matchString_ : pwiz::analysis::SpectrumList_FilterPredicate_ThermoScanFilter
- matrix_type : pwiz::math::Stats
- max : pwiz::analysis::RegionAnalyzer::SpectrumStats, pwiz::data::FrequencyData
- MAX_ID : pwiz::data::Term
- max_num_items : pwiz::util::mru_list< Item, KeyExtractor >
- max_size() : pwiz::util::BinaryData< T >, pwiz::util::mru_list< Item, KeyExtractor >, pwiz::util::shared_map< keyT, valueT, _Pr, _Alloc >, pwiz::util::virtual_map< keyT, valueT, _Pr, _Alloc >
- maxCharge : pwiz::analysis::MS2Deisotoper::Config, pwiz::analysis::PeakelPicker_Basic::Config, TestChargeStateCalculator
- maxCharge_ : pwiz::analysis::SpectrumList_ChargeFromIsotope, pwiz::analysis::SpectrumList_ChargeStateCalculator
- maximumLength : pwiz::proteome::Digestion::Config
- maximumMissedCleavages : pwiz::proteome::Digestion::Config
- maxIntensity : pwiz::data::peakdata::Peakel
- maxIsotopePeaks : pwiz::analysis::SpectrumList_ChargeFromIsotope
- maxKnownCharge : TestChargeStateCalculator
- maxKnownCharge_ : pwiz::analysis::SpectrumList_ChargeStateCalculator
- maxMultipleCharge : TestChargeStateCalculator
- maxNumberPeaks : pwiz::analysis::SpectrumList_ChargeFromIsotope
- maxnumbersofpeaks_ : ralab::base::ms::PeakPicker< TReal, TIntegrator >
- maxNumInternalCleavages : pwiz::data::pepxml::EnzymaticSearchConstraint
- md : TestModifiedPeptide
- mean : pwiz::analysis::Noise, pwiz::data::FrequencyData, pwiz::math::Stats
- mean_peak_mz : pwiz::analysis::RegionAnalyzer::Stats
- meanOuterProduct() : pwiz::math::Stats
- meanSquare() : pwiz::data::FrequencyData
- Measure() : pwiz::identdata::Measure
- measurePtr : pwiz::identdata::FragmentArray
- median : pwiz::util::MSIHandler::Record
- MemoryIndex() : pwiz::data::MemoryIndex
- MemoryMRUCache() : pwiz::msdata::MemoryMRUCache< PtrType, KeyExtractor >
- message : pwiz::util::IterationListener::UpdateMessage
- Mexican_Hat() : ralab::base::filter::utilities::Mexican_Hat< TReal >
- Mexican_Hat2() : ralab::base::filter::utilities::Mexican_Hat2< TReal >
- mextend() : ralab::base::ms::LocalMinPeakArea< TReal >
- midInitials : pwiz::identdata::Person
- min_prob : pwiz::data::pepxml::ErrorPoint, pwiz::data::pepxml::PeptideProphetSummary, pwiz::data::pepxml::RocDataPoint
- minCharge : pwiz::analysis::MS2Deisotoper::Config, pwiz::analysis::PeakelPicker_Basic::Config, TestChargeStateCalculator
- minCharge_ : pwiz::analysis::SpectrumList_ChargeFromIsotope, pwiz::analysis::SpectrumList_ChargeStateCalculator
- minDistance : pwiz::identdata::Enzyme
- mine_ : pwiz::data::diff_impl::Same< object_type, config_type >, pwiz::data::diff_impl::SameDeep< object_type, config_type >
- minimumLength : pwiz::proteome::Digestion::Config
- minimumSpecificity : pwiz::proteome::Digestion::Config
- minIsotopePeaks : pwiz::analysis::SpectrumList_ChargeFromIsotope
- minMonoisotopicPeakelSize : pwiz::analysis::PeakelPicker_Basic::Config
- minMultipleCharge : TestChargeStateCalculator
- minNumberPeaks : pwiz::analysis::SpectrumList_ChargeFromIsotope
- minNumTermini : pwiz::data::pepxml::EnzymaticSearchConstraint
- Minor() : pwiz::analysis::Version, pwiz::identdata::Version, pwiz::msdata::Version, pwiz::proteome::Version, pwiz::tradata::Version, pwiz::Version
- minPeakelCount : pwiz::analysis::PeakelPicker_Basic::Config
- minSnr_ : pwiz::analysis::CwtPeakDetector
- minSpace : pwiz::data::pepxml::Specificity
- missedCleavages : pwiz::identdata::Enzyme, pwiz::proteome::DigestedPeptide
- missedCleavages_ : pwiz::proteome::DigestedPeptide
- mixture_model : pwiz::data::pepxml::PeptideProphetSummary
- mobilityTol_ : pwiz::analysis::SpectrumList_ScanSummer
- ModAminoAcidMass() : pwiz::data::pepxml::ModAminoAcidMass
- modAminoAcidMass : pwiz::data::pepxml::ModificationInfo
- Mode : pwiz::analysis::SpectrumList_ZeroSamplesFilter
- mode() : pwiz::msdata::MemoryMRUCache< PtrType, KeyExtractor >, pwiz::proteome::ProteinListCache
- mode_ : pwiz::analysis::SpectrumList_3D, pwiz::analysis::SpectrumList_FilterPredicate_MzPresent, pwiz::analysis::SpectrumList_FilterPredicate_PrecursorMzSet, pwiz::analysis::SpectrumList_PeakPicker, pwiz::analysis::SpectrumList_ZeroSamplesFilter, pwiz::msdata::MemoryMRUCache< PtrType, KeyExtractor >, pwiz::proteome::ProteinListCache
- Mode_AddMissingZeros : pwiz::analysis::SpectrumList_ZeroSamplesFilter
- Mode_RemoveExtraZeros : pwiz::analysis::SpectrumList_ZeroSamplesFilter
- model() : pwiz::msdata::LegacyAdapter_Instrument
- model_1_neg_distr : pwiz::data::pepxml::DistributionPoint
- model_1_pos_distr : pwiz::data::pepxml::DistributionPoint
- model_2_neg_distr : pwiz::data::pepxml::DistributionPoint
- model_2_pos_distr : pwiz::data::pepxml::DistributionPoint
- model_3_neg_distr : pwiz::data::pepxml::DistributionPoint
- model_3_pos_distr : pwiz::data::pepxml::DistributionPoint
- Modification() : pwiz::identdata::Modification
- modification : pwiz::identdata::Peptide
- Modification() : pwiz::proteome::Modification, pwiz::tradata::Modification
- ModificationInfo() : pwiz::data::pepxml::ModificationInfo
- modificationInfo : pwiz::data::pepxml::SearchHit
- ModificationList() : pwiz::proteome::ModificationList
- ModificationMap() : pwiz::proteome::ModificationMap, pwiz::proteome::Peptide
- modificationParams : pwiz::identdata::SpectrumIdentificationProtocol
- modifications() : pwiz::proteome::Peptide, pwiz::tradata::Peptide
- modifiedPeptide : pwiz::data::pepxml::ModificationInfo
- modify() : pwiz::util::mru_list< Item, KeyExtractor >
- mods : TestModifiedPeptide
- modsHaveFormulas : TestModifiedPeptide
- molecularWeight() : pwiz::chemistry::Formula, pwiz::proteome::Peptide
- monoisotope : pwiz::chemistry::Element::Info::Record
- monoisotopicDeltaMass() : pwiz::proteome::Modification, pwiz::proteome::ModificationList, pwiz::proteome::ModificationMap
- monoisotopicFrequency : pwiz::frequency::PeakDetectorMatchedFilter::Score
- monoisotopicIntensity : pwiz::frequency::PeakDetectorMatchedFilter::Score
- monoisotopicMass() : pwiz::chemistry::Formula, pwiz::proteome::Peptide
- monoisotopicMassDelta : pwiz::identdata::Modification, pwiz::identdata::SubstitutionModification, pwiz::tradata::Modification
- monoisotopicPeakThresholdFactor : pwiz::frequency::PeakDetectorMatchedFilter::Config
- monoMass : TestAminoAcid, TestFormula, TestModifiedPeptide
- monoMassNeutral : TestPeptide
- monoMassPlus1 : TestPeptide
- monoMassPlus2 : TestPeptide
- motif : TestModification
- mp : TestModifiedPeptide
- mr_zorg : Fifth
- mru() : pwiz::util::mru_list< Item, KeyExtractor >
- mru_list() : pwiz::util::mru_list< Item, KeyExtractor >
- MS1_INDEX_0 : DemuxHelpersTest
- MS1_INDEX_1 : DemuxHelpersTest
- MS1retentionTimes : pwiz::analysis::SpectrumList_ChargeFromIsotope
- MS1rTime : TestChargeStateCalculator
- MS2_INDEX_0 : DemuxHelpersTest
- MS2_INDEX_1 : DemuxHelpersTest
- MS2Deisotoper() : pwiz::analysis::MS2Deisotoper
- MS2NoiseFilter() : pwiz::analysis::MS2NoiseFilter
- ms2RetentionTimes : pwiz::analysis::SpectrumList_ScanSummer
- MS2rTime : TestChargeStateCalculator
- msd : pwiz::analysis::MSDataAnalyzer::DataInfo
- msd_ : pwiz::analysis::SpectrumList_TitleMaker
- msdata : DemuxTest::MSDPair
- MSData : pwiz::analysis::FeatureDetector, pwiz::analysis::FeatureDetectorPeakel, pwiz::msdata::MSData
- MSDataAnalyzerDriver() : pwiz::analysis::MSDataAnalyzerDriver
- MSDataCache() : pwiz::analysis::MSDataCache
- MSDataFile() : pwiz::msdata::MSDataFile
- MSDataMerger() : pwiz::msdata::MSDataMerger
- MSDataPtr : DemuxTest
- msDetector : pwiz::data::pepxml::MSMSPipelineAnalysis, pwiz::data::pepxml::MSMSRunSummary
- MSDPair() : DemuxTest::MSDPair
- MSIHandler() : pwiz::util::MSIHandler
- msIonization : pwiz::data::pepxml::MSMSPipelineAnalysis, pwiz::data::pepxml::MSMSRunSummary
- msLevel : pwiz::identdata::MassTable, pwiz::msdata::SpectrumInfo
- msLevels : pwiz::analysis::RunSummary::Config, pwiz::analysis::SpectrumList_PeakPicker
- msLevelSet_ : pwiz::analysis::SpectrumList_FilterPredicate_MSLevelSet
- MSLevelsNone : pwiz::msdata::SpectrumListBase
- msLevelsToCentroid : pwiz::msdata::detail::SpectrumList_Waters::VendorOptions
- msLevelsToFilter_ : pwiz::analysis::SpectrumList_ZeroSamplesFilter
- msLevelsToPeakPick_ : pwiz::analysis::SpectrumList_PeakPicker
- msLevelsToSmooth_ : pwiz::analysis::ChromatogramList_SavitzkyGolaySmoother, pwiz::analysis::SpectrumList_Smoother
- msLevelsToThreshold : pwiz::analysis::ThresholdFilter
- msManufacturer : pwiz::data::pepxml::MSMSPipelineAnalysis, pwiz::data::pepxml::MSMSRunSummary
- msMassAnalyzer : pwiz::data::pepxml::MSMSPipelineAnalysis, pwiz::data::pepxml::MSMSRunSummary
- msModel : pwiz::data::pepxml::MSMSPipelineAnalysis, pwiz::data::pepxml::MSMSRunSummary
- MSMSPipelineAnalysis() : pwiz::data::pepxml::MSMSPipelineAnalysis
- msmsRunSummary : pwiz::data::pepxml::MSMSPipelineAnalysis
- MSMSRunSummary() : pwiz::data::pepxml::MSMSRunSummary
- MSnHeader() : pwiz::msdata::MSnHeader
- MSXDemultiplexer() : pwiz::analysis::MSXDemultiplexer
- mu_ : ralab::base::filter::utilities::Gauss< TReal >, ralab::base::filter::utilities::Gauss_1deriv< TReal >, ralab::base::filter::utilities::Mexican_Hat2< TReal >, ralab::base::filter::utilities::Mexican_Hat< TReal >
- MultiReadWrite() : MatrixIOTest
- MyWrapper() : MyWrapper
- mz : Goober, pairData, parentIon, pwiz::analysis::PepxmlRecordReader::record, pwiz::analysis::PrecursorMaskCodec::DemuxBoundary, pwiz::analysis::PrecursorRecalculator::PrecursorInfo, pwiz::analysis::SpectrumList_PrecursorRefine::PrecursorInfo
- MZ : pwiz::chemistry::MZTolerance
- mz() : pwiz::data::CalibrationParameters, pwiz::data::peakdata::Feature, pwiz::data::peakdata::Peak, pwiz::data::peakdata::Peakel
- Mz : pwiz::identdata::Serializer_Text
- mz : pwiz::msdata::MZIntensityPair, pwiz::msdata::SpectrumInfo::PrecursorInfo, pwiz::peptideid::PeptideID::Location, pwiz::peptideid::PeptideID::Record, pwiz::util::MSIHandler::Record, RawMassDatum, Simple, TestDatum
- mzCenter : pwiz::analysis::RegionSIC::Config
- mzFromFilterString() : pwiz::msdata::SpectrumInfo
- mzHash : pwiz::analysis::PrecursorMaskCodec::DemuxBoundary
- mzHigh : pwiz::analysis::DemuxWindow, pwiz::msdata::SpectrumInfo
- mzHigh_ : pwiz::analysis::SpectrumList_MZWindow
- mzInitialEstimate : TestInfo
- MZIntensityPair : pwiz::analysis::PeakFamilyDetector, pwiz::analysis::PrecursorRecalculator, pwiz::msdata::MZIntensityPair
- mzLeftWidth : pwiz::analysis::PrecursorRecalculatorDefault::Config
- mzLow : pwiz::analysis::DemuxWindow, pwiz::msdata::SpectrumInfo
- mzLow_ : pwiz::analysis::SpectrumList_MZWindow
- mzMonoisotopic : pwiz::data::peakdata::PeakFamily
- mzNegativeScans_ : pwiz::analysis::ChromatogramList_LockmassRefiner, pwiz::analysis::SpectrumList_LockmassRefiner
- mzPositiveScans_ : pwiz::analysis::ChromatogramList_LockmassRefiner, pwiz::analysis::SpectrumList_LockmassRefiner
- mzPvalue : scoreChain
- mzRange : pwiz::analysis::RegionAnalyzer::Config, pwiz::analysis::RegionTIC::Config
- mzRank : scoreChain
- mzRightWidth : pwiz::analysis::PrecursorRecalculatorDefault::Config
- mzrtEqual() : mzrtEqual
- mzSet_ : pwiz::analysis::SpectrumList_FilterPredicate_MzPresent
- mzt_ : pwiz::analysis::SpectrumList_FilterPredicate_MzPresent
- mzTol : pwiz::analysis::SpectrumList_ChargeFromIsotope
- mzTol_ : pwiz::analysis::CwtPeakDetector
- mzTolerance : pwiz::analysis::PeakelGrower_Proximity::Config, pwiz::analysis::PeakelPicker_Basic::Config
- MZTolerance() : pwiz::chemistry::MZTolerance
- mzTrue : TestInfo
- mzType : pwiz::identdata::DelimReader
- mzVariance : pwiz::data::peakdata::Peakel