Package: scShardSplitRef
Title: Build Custom Reference Genome for Single-Cell Multiome ATAC and
        Gene Expression Data of Large-Genome Species
Version: 0.1.0
Authors@R: c(
    person("Irina", "Kuznetsova", , "irina.kuznetsova@curtin.edu.au", role = c("aut", "cre"),
           comment = c(ORCID = "0009-0001-5411-6063")),
    person("Luke", "Pembleton", , "lpembleton@barenbrug.com.au", role = "aut",
           comment = c(ORCID = "0000-0001-8131-8210")),
    person("Luca", "Curci", , "pasqualeluca.curci@cnr.it", role = "aut",
           comment = c(ORCID = "0000-0002-5780-3029")),
    person("Adam H.", "Sparks", , "adamhsparks@gmail.com", role = "aut",
           comment = c(ORCID = "0000-0002-0061-8359")),
    person("Curtin University", role = c("fnd", "cph"),
           comment = c(ROR = "02n415q13")),
    person("Grains Research and Development Corporation", role = c("fnd", "cph"),
           comment = c("GRDC Project CUR2210-005OPX (AAGI-CU)", ROR = "02xwr1996"))
  )
Description: Provides utilities that enable researchers to build custom
    references for the Multiome ATAC Gene Expression sequencing data for
    large-genome species without manual intervention.
License: GPL (>= 3)
Depends: R (>= 4.3.0)
Imports: cli, rlang, stringi, utils, withr
Suggests: knitr, rmarkdown, roxyglobals, testthat (>= 3.0.0)
VignetteBuilder: knitr
Config/testthat/edition: 3
Encoding: UTF-8
Config/roxyglobals/filename: globals.R
Config/roxyglobals/unique: FALSE
Config/roxygen2/version: 8.0.0
Config/Needs/build: moodymudskipper/devtag
NeedsCompilation: no
Packaged: 2026-07-15 03:01:12 UTC; ikrstudio
Author: Irina Kuznetsova [aut, cre] (ORCID:
    <https://orcid.org/0009-0001-5411-6063>),
  Luke Pembleton [aut] (ORCID: <https://orcid.org/0000-0001-8131-8210>),
  Luca Curci [aut] (ORCID: <https://orcid.org/0000-0002-5780-3029>),
  Adam H. Sparks [aut] (ORCID: <https://orcid.org/0000-0002-0061-8359>),
  Curtin University [fnd, cph] (ROR: <https://ror.org/02n415q13>),
  Grains Research and Development Corporation [fnd, cph] (GRDC Project
    CUR2210-005OPX (AAGI-CU), ROR: <https://ror.org/02xwr1996>)
Maintainer: Irina Kuznetsova <irina.kuznetsova@curtin.edu.au>
Repository: CRAN
Date/Publication: 2026-07-23 12:30:02 UTC
Built: R 4.6.1; ; 2026-08-30 17:23:12 UTC; windows
